Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
TcraP01849 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Gm21038-201ENSMUST00000222205 1383 ntBASIC8.94□□□□□ -0.98
TcraP01849 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
TcraP01849 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
TcraP01849 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC8.94□□□□□ -0.98
TcraP01849 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
TcraP01849 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
TcraP01849 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TcraP01849 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
TcraP01849 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
TcraP01849 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
TcraP01849 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC8.93□□□□□ -0.98
TcraP01849 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
TcraP01849 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 AC122811.1-201ENSMUST00000222257 2921 ntBASIC8.93□□□□□ -0.98
TcraP01849 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
TcraP01849 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
TcraP01849 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
TcraP01849 Gm21854-201ENSMUST00000179901 471 ntBASIC8.93□□□□□ -0.98
TcraP01849 Gm29667-201ENSMUST00000190817 490 ntBASIC8.93□□□□□ -0.98
TcraP01849 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.93□□□□□ -0.98
TcraP01849 AC135669.1-202ENSMUST00000216742 540 ntBASIC8.93□□□□□ -0.98
TcraP01849 Hist1h2al-201ENSMUST00000091708 339 ntBASIC8.93□□□□□ -0.98
TcraP01849 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Gm42498-201ENSMUST00000199981 1372 ntBASIC8.93□□□□□ -0.98
TcraP01849 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC8.93□□□□□ -0.98
TcraP01849 AC130671.2-201ENSMUST00000227224 1621 ntBASIC8.93□□□□□ -0.98
TcraP01849 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
TcraP01849 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC8.93□□□□□ -0.98
TcraP01849 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
TcraP01849 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC8.92□□□□□ -0.98
TcraP01849 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC8.92□□□□□ -0.98
TcraP01849 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
TcraP01849 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TcraP01849 Gm3365-201ENSMUST00000216296 1480 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms