Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm3329-201ENSMUST00000159873 556 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm6485-201ENSMUST00000160676 439 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm5616-201ENSMUST00000165252 384 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm8741-201ENSMUST00000174736 384 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm25998-201ENSMUST00000175397 53 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm17877-201ENSMUST00000192578 814 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm18038-201ENSMUST00000197900 485 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm42657-201ENSMUST00000201746 211 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm40879-201ENSMUST00000220759 612 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Gm19009-201ENSMUST00000223072 823 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
AlyrefO08583 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.48□□□□□ -0.41
AlyrefO08583 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AlyrefO08583 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.48□□□□□ -0.41
AlyrefO08583 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AlyrefO08583 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AlyrefO08583 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
AlyrefO08583 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AlyrefO08583 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AlyrefO08583 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.47□□□□□ -0.41
AlyrefO08583 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm24891-201ENSMUST00000104391 136 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.47□□□□□ -0.41
AlyrefO08583 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm13492-201ENSMUST00000119772 665 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm26989-201ENSMUST00000182608 749 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Gm6644-201ENSMUST00000186507 951 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm5244-202ENSMUST00000189517 743 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Gm37299-201ENSMUST00000193951 826 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm44647-201ENSMUST00000207402 428 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Gm45925-201ENSMUST00000218882 744 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.47□□□□□ -0.41
AlyrefO08583 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
AlyrefO08583 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
AlyrefO08583 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.47□□□□□ -0.41
AlyrefO08583 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AlyrefO08583 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.47□□□□□ -0.41
AlyrefO08583 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.46□□□□□ -0.41
AlyrefO08583 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AlyrefO08583 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
AlyrefO08583 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AlyrefO08583 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AlyrefO08583 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.46□□□□□ -0.41
AlyrefO08583 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AlyrefO08583 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms