Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
MsmbO08540 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.43□□□□□ -0.9
MsmbO08540 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MsmbO08540 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.42□□□□□ -0.9
MsmbO08540 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.42□□□□□ -0.9
MsmbO08540 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.42□□□□□ -0.9
MsmbO08540 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
MsmbO08540 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
MsmbO08540 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.42□□□□□ -0.9
MsmbO08540 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.42□□□□□ -0.9
MsmbO08540 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.42□□□□□ -0.9
MsmbO08540 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Mir3547-201ENSMUST00000175461 88 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.42□□□□□ -0.9
MsmbO08540 Gm8885-201ENSMUST00000189382 598 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.42□□□□□ -0.9
MsmbO08540 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.42□□□□□ -0.9
MsmbO08540 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
MsmbO08540 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
MsmbO08540 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
MsmbO08540 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
MsmbO08540 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 AC121805.2-201ENSMUST00000218808 2538 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
MsmbO08540 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.42□□□□□ -0.9
MsmbO08540 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MsmbO08540 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.41□□□□□ -0.9
MsmbO08540 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
MsmbO08540 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
MsmbO08540 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms