Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim30bE9PVL6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Gm11667-201ENSMUST00000119828 486 ntBASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Gm10774-201ENSMUST00000188689 204 ntBASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Mir7686-201ENSMUST00000200604 57 ntBASIC13.02□□□□□ -0.33
Trim30bE9PVL6 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.02□□□□□ -0.33
Trim30bE9PVL6 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim30bE9PVL6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.01□□□□□ -0.33
Trim30bE9PVL6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Gm13809-201ENSMUST00000117921 597 ntBASIC13.01□□□□□ -0.33
Trim30bE9PVL6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Gm17391-201ENSMUST00000171036 126 ntBASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.01□□□□□ -0.33
Trim30bE9PVL6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Gm44882-201ENSMUST00000205702 802 ntBASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Gm9797-202ENSMUST00000218003 294 ntBASIC13.01□□□□□ -0.33
Trim30bE9PVL6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30bE9PVL6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30bE9PVL6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trim30bE9PVL6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30bE9PVL6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30bE9PVL6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30bE9PVL6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30bE9PVL6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30bE9PVL6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms