Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm9415-201ENSMUST00000200462 1321 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm18059-201ENSMUST00000208073 580 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm45410-201ENSMUST00000211331 1093 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Ap3s1-202ENSMUST00000224622 978 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Gm10263-201ENSMUST00000085163 300 ntBASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn7aB1AYL1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm12247-201ENSMUST00000117585 670 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm11340-201ENSMUST00000119226 412 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm12791-201ENSMUST00000120788 655 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm10169-201ENSMUST00000121822 348 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm24398-201ENSMUST00000157870 109 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm15784-201ENSMUST00000120260 1462 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Gm8146-201ENSMUST00000192106 1847 ntBASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn7aB1AYL1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Gm15528-201ENSMUST00000117821 864 ntBASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn7aB1AYL1 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms