Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trbv29A0A0G2LB96 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Gm27847-201ENSMUST00000183711 107 ntBASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Gm27375-201ENSMUST00000183799 107 ntBASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Gm45925-201ENSMUST00000218882 744 ntBASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trbv29A0A0G2LB96 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trbv29A0A0G2LB96 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.14□□□□□ -0.79
Trbv29A0A0G2LB96 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms