Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gm11424-201ENSMUST00000121929 829 ntBASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm12138-201ENSMUST00000122180 951 ntBASIC12.72□□□□□ -0.37
Speer3W4VSP1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm22923-201ENSMUST00000174952 110 ntBASIC12.72□□□□□ -0.37
Speer3W4VSP1 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Trbv27-201ENSMUST00000193711 277 ntBASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm42464-201ENSMUST00000196717 417 ntBASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 AC132104.1-201ENSMUST00000213615 260 ntBASIC12.72□□□□□ -0.37
Speer3W4VSP1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.72□□□□□ -0.37
Speer3W4VSP1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Gm45210-201ENSMUST00000206401 1577 ntBASIC12.72□□□□□ -0.37
Speer3W4VSP1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.72□□□□□ -0.37
Speer3W4VSP1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.71□□□□□ -0.37
Speer3W4VSP1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm6244-201ENSMUST00000178732 841 ntBASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Gm44069-201ENSMUST00000204898 506 ntBASIC12.71□□□□□ -0.37
Speer3W4VSP1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Speer3W4VSP1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Speer3W4VSP1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.71□□□□□ -0.38
Speer3W4VSP1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Speer3W4VSP1 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Speer3W4VSP1 Gm11618-201ENSMUST00000117946 267 ntBASIC12.7□□□□□ -0.38
Speer3W4VSP1 Gm6027-201ENSMUST00000121467 756 ntBASIC12.7□□□□□ -0.38
Speer3W4VSP1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms