Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ClpxQ9JHS4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ClpxQ9JHS4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Gm12390-201ENSMUST00000117897 397 ntBASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Gm11425-201ENSMUST00000119608 498 ntBASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Gm22331-201ENSMUST00000158066 136 ntBASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Gm24196-201ENSMUST00000179161 110 ntBASIC11.25□□□□□ -0.61
ClpxQ9JHS4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Gm9396-201ENSMUST00000076703 567 ntBASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ClpxQ9JHS4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gm8810-201ENSMUST00000172895 754 ntBASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.24□□□□□ -0.61
ClpxQ9JHS4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
ClpxQ9JHS4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ClpxQ9JHS4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms