Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tubb3Q9ERD7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Snord83b-201ENSMUST00000104546 94 ntBASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Gm26083-201ENSMUST00000157904 193 ntBASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Gm5904-201ENSMUST00000210286 865 ntBASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Morn2-202ENSMUST00000227729 656 ntBASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.19□□□□□ -0.46
Tubb3Q9ERD7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gm27320-201ENSMUST00000184892 109 ntBASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.18□□□□□ -0.46
Tubb3Q9ERD7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tubb3Q9ERD7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms