Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmgn3Q9DCB1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm12036-201ENSMUST00000120008 530 ntBASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm8099-201ENSMUST00000200510 742 ntBASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmgn3Q9DCB1 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm15371-201ENSMUST00000117057 784 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm5687-201ENSMUST00000118252 640 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm14704-201ENSMUST00000120300 874 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm16296-201ENSMUST00000159905 325 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmgn3Q9DCB1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms