Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.48□□□□□ -0.25
Cfap53Q9D439 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cfap53Q9D439 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.48□□□□□ -0.25
Cfap53Q9D439 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm29396-201ENSMUST00000185659 716 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm43118-201ENSMUST00000199149 775 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Matn2-203ENSMUST00000226766 3252 ntBASIC13.47□□□□□ -0.25
Cfap53Q9D439 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cfap53Q9D439 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.46□□□□□ -0.25
Cfap53Q9D439 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.46□□□□□ -0.25
Cfap53Q9D439 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm13570-201ENSMUST00000140763 309 ntBASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm10608-202ENSMUST00000213924 676 ntBASIC13.46□□□□□ -0.25
Cfap53Q9D439 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm7046-201ENSMUST00000221351 977 ntBASIC13.46□□□□□ -0.25
Cfap53Q9D439 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cfap53Q9D439 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.46□□□□□ -0.26
Cfap53Q9D439 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cfap53Q9D439 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cfap53Q9D439 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cfap53Q9D439 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cfap53Q9D439 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
Cfap53Q9D439 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cfap53Q9D439 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cfap53Q9D439 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.45□□□□□ -0.26
Cfap53Q9D439 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cfap53Q9D439 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cfap53Q9D439 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms