Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.13□□□□□ -0.31
TraipQ8VIG6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Gm11941-201ENSMUST00000119904 610 ntBASIC13.13□□□□□ -0.31
TraipQ8VIG6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.13□□□□□ -0.31
TraipQ8VIG6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.13□□□□□ -0.31
TraipQ8VIG6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm43488-201ENSMUST00000198874 2504 ntBASIC13.12□□□□□ -0.31
TraipQ8VIG6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.12□□□□□ -0.31
TraipQ8VIG6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.12□□□□□ -0.31
TraipQ8VIG6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.12□□□□□ -0.31
TraipQ8VIG6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm43184-201ENSMUST00000197247 542 ntBASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.12□□□□□ -0.31
TraipQ8VIG6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.12□□□□□ -0.31
TraipQ8VIG6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TraipQ8VIG6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TraipQ8VIG6 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms