Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.38□□□□□ -0.43
Clip4Q8CI96 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm12241-201ENSMUST00000118330 726 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm37489-201ENSMUST00000191883 159 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm7046-201ENSMUST00000221351 977 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm8227-201ENSMUST00000223306 571 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip4Q8CI96 Cog3-203ENSMUST00000227473 4197 ntBASIC12.37□□□□□ -0.43
Clip4Q8CI96 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.36□□□□□ -0.43
Clip4Q8CI96 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.36□□□□□ -0.43
Clip4Q8CI96 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Gm15370-201ENSMUST00000117158 253 ntBASIC12.36□□□□□ -0.43
Clip4Q8CI96 Gm14723-201ENSMUST00000118686 215 ntBASIC12.36□□□□□ -0.43
Clip4Q8CI96 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Gm13297-201ENSMUST00000120205 934 ntBASIC12.36□□□□□ -0.43
Clip4Q8CI96 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Gm38092-201ENSMUST00000195600 653 ntBASIC12.36□□□□□ -0.43
Clip4Q8CI96 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.36□□□□□ -0.43
Clip4Q8CI96 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.36□□□□□ -0.43
Clip4Q8CI96 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Clip4Q8CI96 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms