Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.18□□□□□ -0.14
Shisa4Q8CA71 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 AY036118-201ENSMUST00000200021 923 ntBASIC14.18□□□□□ -0.14
Shisa4Q8CA71 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Gm45118-201ENSMUST00000208928 825 ntBASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.18□□□□□ -0.14
Shisa4Q8CA71 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm23949-201ENSMUST00000104027 127 ntBASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm26286-201ENSMUST00000104166 134 ntBASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.17□□□□□ -0.14
Shisa4Q8CA71 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Gm15711-201ENSMUST00000118889 535 ntBASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Gm9550-201ENSMUST00000161130 862 ntBASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Gm27552-201ENSMUST00000183351 62 ntBASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Gm27844-201ENSMUST00000183613 62 ntBASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Gm28450-201ENSMUST00000187349 638 ntBASIC14.16□□□□□ -0.14
Shisa4Q8CA71 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shisa4Q8CA71 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shisa4Q8CA71 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms