Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim9Q8C7M3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm23270-201ENSMUST00000104055 131 ntBASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm43630-201ENSMUST00000201550 776 ntBASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim9Q8C7M3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Cts7-204ENSMUST00000225321 1257 ntBASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim9Q8C7M3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim9Q8C7M3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms