Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.29□□□□□ -0.76
Tsen54Q8C2A2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tsen54Q8C2A2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Tsen54Q8C2A2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm12928-201ENSMUST00000117115 573 ntBASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm17794-201ENSMUST00000220252 955 ntBASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Tsen54Q8C2A2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Tsen54Q8C2A2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tsen54Q8C2A2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tsen54Q8C2A2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tsen54Q8C2A2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tsen54Q8C2A2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tsen54Q8C2A2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tsen54Q8C2A2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Tsen54Q8C2A2 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Btrc-209ENSMUST00000224478 2194 ntBASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Gm2495-201ENSMUST00000191160 466 ntBASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Gm5356-201ENSMUST00000093326 615 ntBASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tsen54Q8C2A2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms