Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.79□□□□□ -0.36
Sh3rf3Q8C120 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Mir8109-201ENSMUST00000184375 117 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm42627-201ENSMUST00000197347 224 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm6013-201ENSMUST00000212264 699 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm18935-201ENSMUST00000212692 664 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm7399-201ENSMUST00000032395 858 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.78□□□□□ -0.36
Sh3rf3Q8C120 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf3Q8C120 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm13297-201ENSMUST00000120205 934 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm24845-201ENSMUST00000158034 109 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm27023-201ENSMUST00000182372 285 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm37489-201ENSMUST00000191883 159 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm43630-201ENSMUST00000201550 776 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.77□□□□□ -0.37
Sh3rf3Q8C120 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf3Q8C120 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms