Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm27243-201ENSMUST00000183964 521 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm18304-201ENSMUST00000189162 546 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm38341-201ENSMUST00000195357 515 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sfr1Q8BP27 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Gm9630-201ENSMUST00000178304 885 ntBASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Gm31256-201ENSMUST00000194705 506 ntBASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Gm43758-201ENSMUST00000199500 367 ntBASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sfr1Q8BP27 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gm25214-201ENSMUST00000104573 129 ntBASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gm14381-201ENSMUST00000122105 414 ntBASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gm7783-201ENSMUST00000204795 781 ntBASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gm39404-201ENSMUST00000216350 313 ntBASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sfr1Q8BP27 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms