Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.58□□□□□ -0.56
Clrn3Q8BHH8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Gm6023-201ENSMUST00000118217 606 ntBASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Gm44405-201ENSMUST00000198952 126 ntBASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clrn3Q8BHH8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm23931-201ENSMUST00000103842 109 ntBASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm24231-201ENSMUST00000104315 133 ntBASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm17420-201ENSMUST00000164753 153 ntBASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm43133-201ENSMUST00000197472 463 ntBASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Gm19309-201ENSMUST00000218295 205 ntBASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clrn3Q8BHH8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms