Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atg4dQ8BGV9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gm13996-201ENSMUST00000118456 430 ntBASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gm5706-201ENSMUST00000181525 993 ntBASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gm38241-201ENSMUST00000192641 898 ntBASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gm4857-201ENSMUST00000192718 785 ntBASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atg4dQ8BGV9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atg4dQ8BGV9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atg4dQ8BGV9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Atg4dQ8BGV9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms