Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm12029-201ENSMUST00000120073 832 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm14460-201ENSMUST00000121511 639 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm28693-202ENSMUST00000190758 331 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm38210-201ENSMUST00000191944 809 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm8365-201ENSMUST00000197334 648 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm43916-201ENSMUST00000205062 967 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf38bQ80SY5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Gm13183-201ENSMUST00000118615 789 ntBASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Gm17889-201ENSMUST00000198410 598 ntBASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Prpf38bQ80SY5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf38bQ80SY5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms