Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm7940-201ENSMUST00000218195 769 ntBASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chd4Q6PDQ2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Gm15374-201ENSMUST00000119313 844 ntBASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Gm12036-201ENSMUST00000120008 530 ntBASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Gm14585-201ENSMUST00000120713 634 ntBASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Gm8459-201ENSMUST00000162504 760 ntBASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Gm17798-201ENSMUST00000182282 1035 ntBASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chd4Q6PDQ2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd4Q6PDQ2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Chd4Q6PDQ2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Chd4Q6PDQ2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd4Q6PDQ2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chd4Q6PDQ2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm14942-201ENSMUST00000119642 336 ntBASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm21778-201ENSMUST00000178779 471 ntBASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm44506-201ENSMUST00000206278 965 ntBASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm19009-201ENSMUST00000223072 823 ntBASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm11949-201ENSMUST00000117640 372 ntBASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm29410-201ENSMUST00000188383 694 ntBASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd4Q6PDQ2 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Gm1848-201ENSMUST00000120711 789 ntBASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Gm11960-201ENSMUST00000122068 925 ntBASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chd4Q6PDQ2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms