Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdnep1Q3TP92 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdnep1Q3TP92 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ctdnep1Q3TP92 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdnep1Q3TP92 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctdnep1Q3TP92 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ctdnep1Q3TP92 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Gm43630-201ENSMUST00000201550 776 ntBASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Cts7-204ENSMUST00000225321 1257 ntBASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ctdnep1Q3TP92 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Gm14644-201ENSMUST00000116671 647 ntBASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Gm5706-201ENSMUST00000181525 993 ntBASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Gm45865-201ENSMUST00000211815 945 ntBASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdnep1Q3TP92 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdnep1Q3TP92 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms