Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Gm14644-201ENSMUST00000116671 647 ntBASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Gm13813-201ENSMUST00000120998 787 ntBASIC11.59□□□□□ -0.55
Treml4Q3LRV9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.59□□□□□ -0.55
Treml4Q3LRV9 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.59□□□□□ -0.55
Treml4Q3LRV9 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.59□□□□□ -0.55
Treml4Q3LRV9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Treml4Q3LRV9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Treml4Q3LRV9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Treml4Q3LRV9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Treml4Q3LRV9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Treml4Q3LRV9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Treml4Q3LRV9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Treml4Q3LRV9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Gm16296-201ENSMUST00000159905 325 ntBASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Gm43058-201ENSMUST00000197645 625 ntBASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Gm45219-201ENSMUST00000205602 465 ntBASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Mir339-201ENSMUST00000083659 96 ntBASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Treml4Q3LRV9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Treml4Q3LRV9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms