Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Map1b-203ENSMUST00000223725 2669 ntBASIC13.34□□□□□ -0.27
Trim43cP86449 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Gm12164-201ENSMUST00000121695 551 ntBASIC13.34□□□□□ -0.27
Trim43cP86449 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim43cP86449 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim43cP86449 Gm35960-201ENSMUST00000202712 767 ntBASIC13.34□□□□□ -0.27
Trim43cP86449 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.34□□□□□ -0.27
Trim43cP86449 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim43cP86449 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim43cP86449 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43cP86449 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43cP86449 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43cP86449 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43cP86449 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim43cP86449 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43cP86449 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43cP86449 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43cP86449 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trim43cP86449 Gm11930-201ENSMUST00000117788 190 ntBASIC13.33□□□□□ -0.28
Trim43cP86449 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.33□□□□□ -0.28
Trim43cP86449 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim43cP86449 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim43cP86449 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim43cP86449 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43cP86449 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.33□□□□□ -0.28
Trim43cP86449 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim43cP86449 Gm26956-201ENSMUST00000182176 986 ntBASIC13.33□□□□□ -0.28
Trim43cP86449 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim43cP86449 Gm38341-201ENSMUST00000195357 515 ntBASIC13.33□□□□□ -0.28
Trim43cP86449 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim43cP86449 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43cP86449 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim43cP86449 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim43cP86449 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43cP86449 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.33□□□□□ -0.28
Trim43cP86449 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim43cP86449 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.33□□□□□ -0.28
Trim43cP86449 Matn2-203ENSMUST00000226766 3252 ntBASIC13.33□□□□□ -0.28
Trim43cP86449 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43cP86449 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim43cP86449 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim43cP86449 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43cP86449 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trim43cP86449 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43cP86449 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim43cP86449 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43cP86449 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.32□□□□□ -0.28
Trim43cP86449 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim43cP86449 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43cP86449 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Gm14723-201ENSMUST00000118686 215 ntBASIC13.32□□□□□ -0.28
Trim43cP86449 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim43cP86449 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Gm18711-201ENSMUST00000199341 750 ntBASIC13.32□□□□□ -0.28
Trim43cP86449 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim43cP86449 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim43cP86449 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.32□□□□□ -0.28
Trim43cP86449 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.32□□□□□ -0.28
Trim43cP86449 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trim43cP86449 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim43cP86449 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms