Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm13736-201ENSMUST00000119272 253 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm13315-201ENSMUST00000120376 991 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm26956-201ENSMUST00000182176 986 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm2546-201ENSMUST00000182630 991 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm45331-201ENSMUST00000209868 554 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.24□□□□□ -0.77
Pdlim4P70271 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pdlim4P70271 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pdlim4P70271 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Gm24231-201ENSMUST00000104315 133 ntBASIC10.23□□□□□ -0.77
Pdlim4P70271 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.23□□□□□ -0.77
Pdlim4P70271 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.23□□□□□ -0.77
Pdlim4P70271 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pdlim4P70271 Gm2991-201ENSMUST00000173338 480 ntBASIC10.23□□□□□ -0.77
Pdlim4P70271 Gm44364-201ENSMUST00000198368 141 ntBASIC10.23□□□□□ -0.77
Pdlim4P70271 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.23□□□□□ -0.77
Pdlim4P70271 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms