Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Gm13342-201ENSMUST00000121055 207 ntBASIC13.53□□□□□ -0.24
Hmgb1P63158 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Gm6222-202ENSMUST00000182143 629 ntBASIC13.53□□□□□ -0.24
Hmgb1P63158 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.53□□□□□ -0.24
Hmgb1P63158 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb1P63158 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC13.53□□□□□ -0.24
Hmgb1P63158 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb1P63158 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmgb1P63158 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Hmgb1P63158 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.52□□□□□ -0.24
Hmgb1P63158 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Hmgb1P63158 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hmgb1P63158 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Hmgb1P63158 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmgb1P63158 Gm25261-201ENSMUST00000157416 134 ntBASIC13.52□□□□□ -0.25
Hmgb1P63158 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.52□□□□□ -0.25
Hmgb1P63158 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.52□□□□□ -0.25
Hmgb1P63158 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmgb1P63158 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Hmgb1P63158 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hmgb1P63158 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmgb1P63158 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.52□□□□□ -0.25
Hmgb1P63158 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.52□□□□□ -0.25
Hmgb1P63158 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hmgb1P63158 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hmgb1P63158 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.51□□□□□ -0.25
Hmgb1P63158 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Gm8602-201ENSMUST00000184045 607 ntBASIC13.51□□□□□ -0.25
Hmgb1P63158 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hmgb1P63158 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hmgb1P63158 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms