Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Fdft1P53798 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.27□□□□□ -0.44
Fdft1P53798 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fdft1P53798 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Fdft1P53798 Gm11597-201ENSMUST00000121423 964 ntBASIC12.27□□□□□ -0.45
Fdft1P53798 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.27□□□□□ -0.45
Fdft1P53798 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.27□□□□□ -0.45
Fdft1P53798 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.27□□□□□ -0.45
Fdft1P53798 Gm8018-201ENSMUST00000173536 789 ntBASIC12.27□□□□□ -0.45
Fdft1P53798 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.27□□□□□ -0.45
Fdft1P53798 Gm9022-201ENSMUST00000182482 992 ntBASIC12.27□□□□□ -0.45
Fdft1P53798 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Gm5370-201ENSMUST00000187187 574 ntBASIC12.27□□□□□ -0.45
Fdft1P53798 Gm44405-201ENSMUST00000198952 126 ntBASIC12.27□□□□□ -0.45
Fdft1P53798 Gm45925-201ENSMUST00000218882 744 ntBASIC12.27□□□□□ -0.45
Fdft1P53798 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.27□□□□□ -0.45
Fdft1P53798 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Fdft1P53798 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.27□□□□□ -0.45
Fdft1P53798 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fdft1P53798 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.26□□□□□ -0.45
Fdft1P53798 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.26□□□□□ -0.45
Fdft1P53798 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.26□□□□□ -0.45
Fdft1P53798 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.26□□□□□ -0.45
Fdft1P53798 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.26□□□□□ -0.45
Fdft1P53798 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Fdft1P53798 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Fdft1P53798 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Fdft1P53798 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Fdft1P53798 Gm37008-201ENSMUST00000195712 319 ntBASIC12.26□□□□□ -0.45
Fdft1P53798 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Fdft1P53798 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.26□□□□□ -0.45
Fdft1P53798 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fdft1P53798 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Fdft1P53798 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.25□□□□□ -0.45
Fdft1P53798 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fdft1P53798 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.25□□□□□ -0.45
Fdft1P53798 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.25□□□□□ -0.45
Fdft1P53798 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Fdft1P53798 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Fdft1P53798 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Gm13315-201ENSMUST00000120376 991 ntBASIC12.25□□□□□ -0.45
Fdft1P53798 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.25□□□□□ -0.45
Fdft1P53798 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.25□□□□□ -0.45
Fdft1P53798 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Gm27514-201ENSMUST00000183692 110 ntBASIC12.25□□□□□ -0.45
Fdft1P53798 Gm19184-201ENSMUST00000196798 928 ntBASIC12.25□□□□□ -0.45
Fdft1P53798 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fdft1P53798 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.25□□□□□ -0.45
Fdft1P53798 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fdft1P53798 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms