Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pdx1P52946 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.11□□□□□ -0.47
Pdx1P52946 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm14381-201ENSMUST00000122105 414 ntBASIC12.11□□□□□ -0.47
Pdx1P52946 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm8885-201ENSMUST00000189382 598 ntBASIC12.11□□□□□ -0.47
Pdx1P52946 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm19994-201ENSMUST00000217086 586 ntBASIC12.11□□□□□ -0.47
Pdx1P52946 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.11□□□□□ -0.47
Pdx1P52946 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pdx1P52946 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.11□□□□□ -0.47
Pdx1P52946 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pdx1P52946 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pdx1P52946 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.1□□□□□ -0.47
Pdx1P52946 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdx1P52946 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pdx1P52946 Gm27046-201ENSMUST00000182160 463 ntBASIC12.1□□□□□ -0.47
Pdx1P52946 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.1□□□□□ -0.47
Pdx1P52946 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.1□□□□□ -0.47
Pdx1P52946 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pdx1P52946 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Cog3-203ENSMUST00000227473 4197 ntBASIC12.1□□□□□ -0.47
Pdx1P52946 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pdx1P52946 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms