Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox2P48432 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.47□□□□□ -0.57
Sox2P48432 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox2P48432 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox2P48432 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.47□□□□□ -0.57
Sox2P48432 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.47□□□□□ -0.57
Sox2P48432 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Gm7488-201ENSMUST00000117148 684 ntBASIC11.47□□□□□ -0.57
Sox2P48432 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox2P48432 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Sox2P48432 Gm27331-201ENSMUST00000183705 60 ntBASIC11.47□□□□□ -0.57
Sox2P48432 Gm27243-201ENSMUST00000183964 521 ntBASIC11.47□□□□□ -0.57
Sox2P48432 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.47□□□□□ -0.57
Sox2P48432 Gm19163-201ENSMUST00000223313 780 ntBASIC11.47□□□□□ -0.57
Sox2P48432 Gm24526-201ENSMUST00000082921 158 ntBASIC11.47□□□□□ -0.57
Sox2P48432 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox2P48432 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox2P48432 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox2P48432 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.46□□□□□ -0.57
Sox2P48432 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.46□□□□□ -0.57
Sox2P48432 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Sox2P48432 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.46□□□□□ -0.57
Sox2P48432 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Gm4034-201ENSMUST00000187674 480 ntBASIC11.46□□□□□ -0.57
Sox2P48432 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.46□□□□□ -0.57
Sox2P48432 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.46□□□□□ -0.57
Sox2P48432 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.46□□□□□ -0.57
Sox2P48432 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox2P48432 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox2P48432 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sox2P48432 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox2P48432 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox2P48432 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox2P48432 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sox2P48432 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox2P48432 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Sox2P48432 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.46□□□□□ -0.58
Sox2P48432 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.46□□□□□ -0.58
Sox2P48432 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.46□□□□□ -0.58
Sox2P48432 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox2P48432 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox2P48432 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Sox2P48432 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox2P48432 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox2P48432 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox2P48432 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox2P48432 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox2P48432 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox2P48432 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox2P48432 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox2P48432 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox2P48432 Gm11964-201ENSMUST00000120982 444 ntBASIC11.45□□□□□ -0.58
Sox2P48432 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox2P48432 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox2P48432 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms