Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HttP42859 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.64□□□□□ -0.39
HttP42859 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.64□□□□□ -0.39
HttP42859 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HttP42859 Gm24294-201ENSMUST00000158295 277 ntBASIC12.64□□□□□ -0.39
HttP42859 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.64□□□□□ -0.39
HttP42859 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.64□□□□□ -0.39
HttP42859 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HttP42859 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
HttP42859 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HttP42859 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HttP42859 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.64□□□□□ -0.39
HttP42859 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Gm16030-201ENSMUST00000159098 603 ntBASIC12.64□□□□□ -0.39
HttP42859 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HttP42859 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HttP42859 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HttP42859 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Gm4294-201ENSMUST00000105169 614 ntBASIC12.64□□□□□ -0.39
HttP42859 Gm6158-201ENSMUST00000109467 904 ntBASIC12.64□□□□□ -0.39
HttP42859 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC12.64□□□□□ -0.39
HttP42859 Kif4-ps-202ENSMUST00000185083 652 ntBASIC12.64□□□□□ -0.39
HttP42859 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC12.64□□□□□ -0.39
HttP42859 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HttP42859 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HttP42859 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.63□□□□□ -0.39
HttP42859 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
HttP42859 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.63□□□□□ -0.39
HttP42859 Gm16547-201ENSMUST00000159474 293 ntBASIC12.63□□□□□ -0.39
HttP42859 Gm6612-201ENSMUST00000170777 395 ntBASIC12.63□□□□□ -0.39
HttP42859 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.63□□□□□ -0.39
HttP42859 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.63□□□□□ -0.39
HttP42859 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Gm26035-201ENSMUST00000083065 308 ntBASIC12.63□□□□□ -0.39
HttP42859 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.63□□□□□ -0.39
HttP42859 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
HttP42859 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
HttP42859 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.63□□□□□ -0.39
HttP42859 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.63□□□□□ -0.39
HttP42859 Gm18256-201ENSMUST00000209087 907 ntBASIC12.63□□□□□ -0.39
HttP42859 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HttP42859 Gm26313-201ENSMUST00000157770 308 ntBASIC12.62□□□□□ -0.39
HttP42859 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HttP42859 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.62□□□□□ -0.39
HttP42859 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.62□□□□□ -0.39
HttP42859 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HttP42859 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.62□□□□□ -0.39
HttP42859 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HttP42859 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HttP42859 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.62□□□□□ -0.39
HttP42859 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
HttP42859 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HttP42859 Gm15136-201ENSMUST00000120552 533 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms