Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm44651-201ENSMUST00000207343 372 ntBASIC14.2□□□□□ -0.14
Pde6aP27664 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pde6aP27664 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pde6aP27664 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.2□□□□□ -0.14
Pde6aP27664 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6aP27664 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.19□□□□□ -0.14
Pde6aP27664 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pde6aP27664 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.19□□□□□ -0.14
Pde6aP27664 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pde6aP27664 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.19□□□□□ -0.14
Pde6aP27664 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Pde6aP27664 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.19□□□□□ -0.14
Pde6aP27664 Gm42599-201ENSMUST00000201308 469 ntBASIC14.19□□□□□ -0.14
Pde6aP27664 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.19□□□□□ -0.14
Pde6aP27664 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.19□□□□□ -0.14
Pde6aP27664 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.19□□□□□ -0.14
Pde6aP27664 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.19□□□□□ -0.14
Pde6aP27664 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.19□□□□□ -0.14
Pde6aP27664 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6aP27664 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Pde6aP27664 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Pde6aP27664 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Pde6aP27664 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pde6aP27664 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Pde6aP27664 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.18□□□□□ -0.14
Pde6aP27664 Gm9257-201ENSMUST00000221254 232 ntBASIC14.18□□□□□ -0.14
Pde6aP27664 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Pde6aP27664 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pde6aP27664 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.18□□□□□ -0.14
Pde6aP27664 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pde6aP27664 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pde6aP27664 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Gm13296-201ENSMUST00000117854 997 ntBASIC14.17□□□□□ -0.14
Pde6aP27664 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pde6aP27664 Gm4857-201ENSMUST00000192718 785 ntBASIC14.17□□□□□ -0.14
Pde6aP27664 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.17□□□□□ -0.14
Pde6aP27664 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pde6aP27664 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pde6aP27664 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms