Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.63□□□□□ -0.39
Nfkb1P25799 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.63□□□□□ -0.39
Nfkb1P25799 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.63□□□□□ -0.39
Nfkb1P25799 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Gm27552-201ENSMUST00000183351 62 ntBASIC12.63□□□□□ -0.39
Nfkb1P25799 Gm27844-201ENSMUST00000183613 62 ntBASIC12.63□□□□□ -0.39
Nfkb1P25799 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.63□□□□□ -0.39
Nfkb1P25799 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.63□□□□□ -0.39
Nfkb1P25799 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.62□□□□□ -0.39
Nfkb1P25799 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Gm12380-201ENSMUST00000119012 544 ntBASIC12.62□□□□□ -0.39
Nfkb1P25799 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.62□□□□□ -0.39
Nfkb1P25799 AY036118-201ENSMUST00000200021 923 ntBASIC12.62□□□□□ -0.39
Nfkb1P25799 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.62□□□□□ -0.39
Nfkb1P25799 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.62□□□□□ -0.39
Nfkb1P25799 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.62□□□□□ -0.39
Nfkb1P25799 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.62□□□□□ -0.39
Nfkb1P25799 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nfkb1P25799 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.62□□□□□ -0.39
Nfkb1P25799 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nfkb1P25799 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nfkb1P25799 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.61□□□□□ -0.39
Nfkb1P25799 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nfkb1P25799 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nfkb1P25799 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nfkb1P25799 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.61□□□□□ -0.39
Nfkb1P25799 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.61□□□□□ -0.39
Nfkb1P25799 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.61□□□□□ -0.39
Nfkb1P25799 Gm5616-201ENSMUST00000165252 384 ntBASIC12.61□□□□□ -0.39
Nfkb1P25799 Gm8741-201ENSMUST00000174736 384 ntBASIC12.61□□□□□ -0.39
Nfkb1P25799 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.61□□□□□ -0.39
Nfkb1P25799 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.61□□□□□ -0.39
Nfkb1P25799 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nfkb1P25799 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms