Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Col8a2P25318 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Col8a2P25318 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.23□□□□□ -0.77
Col8a2P25318 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.23□□□□□ -0.77
Col8a2P25318 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.23□□□□□ -0.77
Col8a2P25318 Rprl1-201ENSMUST00000158050 327 ntBASIC10.23□□□□□ -0.77
Col8a2P25318 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Col8a2P25318 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Gm17812-201ENSMUST00000204935 318 ntBASIC10.23□□□□□ -0.77
Col8a2P25318 Gm45433-201ENSMUST00000209386 247 ntBASIC10.23□□□□□ -0.77
Col8a2P25318 Gm45598-202ENSMUST00000210719 986 ntBASIC10.23□□□□□ -0.77
Col8a2P25318 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.23□□□□□ -0.77
Col8a2P25318 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Col8a2P25318 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Col8a2P25318 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Col8a2P25318 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Gm11989-201ENSMUST00000117240 672 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Gm11362-201ENSMUST00000118838 850 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Gm12380-201ENSMUST00000119012 544 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Mir3102-201ENSMUST00000175555 104 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Gm27552-201ENSMUST00000183351 62 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Gm27844-201ENSMUST00000183613 62 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.22□□□□□ -0.77
Col8a2P25318 Mir6927-201ENSMUST00000184494 71 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Rps4l-202ENSMUST00000204242 789 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Gm5363-201ENSMUST00000211927 938 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.22□□□□□ -0.77
Col8a2P25318 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.22□□□□□ -0.77
Col8a2P25318 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Col8a2P25318 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Col8a2P25318 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.22□□□□□ -0.77
Col8a2P25318 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Col8a2P25318 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Col8a2P25318 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Col8a2P25318 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
Col8a2P25318 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms