Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm11425-201ENSMUST00000119608 498 ntBASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm13315-201ENSMUST00000120376 991 ntBASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm27023-201ENSMUST00000182372 285 ntBASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm27390-201ENSMUST00000184516 176 ntBASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm45784-201ENSMUST00000188360 142 ntBASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 AY702102-202ENSMUST00000194651 1173 ntBASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm9396-201ENSMUST00000076703 567 ntBASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Tnfrsf1aP25118 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Gm3890-201ENSMUST00000182416 207 ntBASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Gm44882-201ENSMUST00000205702 802 ntBASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Gm8227-201ENSMUST00000223306 571 ntBASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Tnfrsf1aP25118 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.25□□□□□ -0.77
Tnfrsf1aP25118 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tnfrsf1aP25118 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tnfrsf1aP25118 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Tnfrsf1aP25118 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tnfrsf1aP25118 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tnfrsf1aP25118 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Tnfrsf1aP25118 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms