Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxd8P23463 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxd8P23463 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm11667-201ENSMUST00000119828 486 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm15610-201ENSMUST00000120584 195 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm14126-201ENSMUST00000122345 395 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm7666-201ENSMUST00000146631 819 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxd8P23463 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm4310-201ENSMUST00000177847 889 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm9540-201ENSMUST00000188230 478 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxd8P23463 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm17831-201ENSMUST00000205579 900 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm6867-201ENSMUST00000219165 425 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxd8P23463 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Hoxd8P23463 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.66□□□□□ -0.38
Hoxd8P23463 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Hoxd8P23463 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxd8P23463 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxd8P23463 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.65□□□□□ -0.38
Hoxd8P23463 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm45550-201ENSMUST00000209380 946 ntBASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.65□□□□□ -0.38
Hoxd8P23463 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.65□□□□□ -0.38
Hoxd8P23463 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.65□□□□□ -0.38
Hoxd8P23463 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hoxd8P23463 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxd8P23463 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Hoxd8P23463 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxd8P23463 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.65□□□□□ -0.39
Hoxd8P23463 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.64□□□□□ -0.39
Hoxd8P23463 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxd8P23463 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.64□□□□□ -0.39
Hoxd8P23463 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms