Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.2□□□□□ -0.62
Hmgn1P18608 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Hmgn1P18608 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Hmgn1P18608 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.2□□□□□ -0.62
Hmgn1P18608 Gm10012-201ENSMUST00000078252 192 ntBASIC11.2□□□□□ -0.62
Hmgn1P18608 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Hmgn1P18608 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.2□□□□□ -0.62
Hmgn1P18608 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.2□□□□□ -0.62
Hmgn1P18608 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.2□□□□□ -0.62
Hmgn1P18608 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hmgn1P18608 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Gm12314-201ENSMUST00000118104 538 ntBASIC11.19□□□□□ -0.62
Hmgn1P18608 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Gm24196-201ENSMUST00000179161 110 ntBASIC11.19□□□□□ -0.62
Hmgn1P18608 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Gm18018-201ENSMUST00000198273 408 ntBASIC11.19□□□□□ -0.62
Hmgn1P18608 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.19□□□□□ -0.62
Hmgn1P18608 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hmgn1P18608 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.19□□□□□ -0.62
Hmgn1P18608 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.19□□□□□ -0.62
Hmgn1P18608 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hmgn1P18608 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms