Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmga1P17095 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Hmga1P17095 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.48□□□□□ -0.41
Hmga1P17095 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmga1P17095 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.47□□□□□ -0.41
Hmga1P17095 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmga1P17095 Gm5523-201ENSMUST00000180415 997 ntBASIC12.47□□□□□ -0.41
Hmga1P17095 Gm9211-201ENSMUST00000182882 975 ntBASIC12.47□□□□□ -0.41
Hmga1P17095 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.47□□□□□ -0.41
Hmga1P17095 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.47□□□□□ -0.41
Hmga1P17095 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.47□□□□□ -0.41
Hmga1P17095 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmga1P17095 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.47□□□□□ -0.41
Hmga1P17095 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmga1P17095 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Hmga1P17095 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
Hmga1P17095 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hmga1P17095 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.46□□□□□ -0.41
Hmga1P17095 Gm14263-201ENSMUST00000117955 746 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Gm23085-201ENSMUST00000157849 293 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 Gm22334-201ENSMUST00000158070 133 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.46□□□□□ -0.41
Hmga1P17095 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.46□□□□□ -0.41
Hmga1P17095 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.46□□□□□ -0.41
Hmga1P17095 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.46□□□□□ -0.41
Hmga1P17095 Gm2965-201ENSMUST00000198365 343 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 Gm45118-201ENSMUST00000208928 825 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Ntng1-201ENSMUST00000051253 327 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.46□□□□□ -0.41
Hmga1P17095 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmga1P17095 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmga1P17095 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmga1P17095 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmga1P17095 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hmga1P17095 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmga1P17095 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.46□□□□□ -0.42
Hmga1P17095 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms