Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.25□□□□□ -0.29
RaraP11416 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.25□□□□□ -0.29
RaraP11416 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RaraP11416 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.25□□□□□ -0.29
RaraP11416 Gm24830-201ENSMUST00000102024 166 ntBASIC13.25□□□□□ -0.29
RaraP11416 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
RaraP11416 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RaraP11416 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RaraP11416 Gm8602-201ENSMUST00000184045 607 ntBASIC13.25□□□□□ -0.29
RaraP11416 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.25□□□□□ -0.29
RaraP11416 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.25□□□□□ -0.29
RaraP11416 Gm5781-201ENSMUST00000219792 443 ntBASIC13.25□□□□□ -0.29
RaraP11416 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Gm26232-201ENSMUST00000083360 166 ntBASIC13.25□□□□□ -0.29
RaraP11416 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.25□□□□□ -0.29
RaraP11416 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RaraP11416 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
RaraP11416 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RaraP11416 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.25□□□□□ -0.29
RaraP11416 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.25□□□□□ -0.29
RaraP11416 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RaraP11416 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.25□□□□□ -0.29
RaraP11416 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RaraP11416 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RaraP11416 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 Gm4984-201ENSMUST00000115987 360 ntBASIC13.24□□□□□ -0.29
RaraP11416 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.24□□□□□ -0.29
RaraP11416 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RaraP11416 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.24□□□□□ -0.29
RaraP11416 Gm24548-201ENSMUST00000158650 108 ntBASIC13.24□□□□□ -0.29
RaraP11416 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.24□□□□□ -0.29
RaraP11416 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RaraP11416 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.24□□□□□ -0.29
RaraP11416 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RaraP11416 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RaraP11416 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RaraP11416 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RaraP11416 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.23□□□□□ -0.29
RaraP11416 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RaraP11416 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RaraP11416 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RaraP11416 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.23□□□□□ -0.29
RaraP11416 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms