Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hoxa4P06798 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxa4P06798 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Hoxa4P06798 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Hoxa4P06798 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Gm12164-201ENSMUST00000121695 551 ntBASIC12.07□□□□□ -0.48
Hoxa4P06798 Gm14017-201ENSMUST00000121934 386 ntBASIC12.07□□□□□ -0.48
Hoxa4P06798 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hoxa4P06798 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxa4P06798 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.07□□□□□ -0.48
Hoxa4P06798 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hoxa4P06798 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxa4P06798 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxa4P06798 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxa4P06798 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Hoxa4P06798 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa4P06798 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa4P06798 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa4P06798 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm5419-201ENSMUST00000119301 527 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm7722-201ENSMUST00000120646 741 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm43962-201ENSMUST00000203898 190 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm45224-201ENSMUST00000208203 414 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm45433-201ENSMUST00000209386 247 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm18212-201ENSMUST00000211678 889 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa4P06798 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa4P06798 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.06□□□□□ -0.48
Hoxa4P06798 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hoxa4P06798 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa4P06798 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms