Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim55G3X8Y1 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim55G3X8Y1 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Gm15460-201ENSMUST00000118147 391 ntBASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim55G3X8Y1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Gm27622-201ENSMUST00000183779 60 ntBASIC12.57□□□□□ -0.4
Trim55G3X8Y1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms