Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.6□□□□□ -0.39
Atf6F6VAN0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.6□□□□□ -0.39
Atf6F6VAN0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm25043-201ENSMUST00000158604 212 ntBASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm17420-201ENSMUST00000164753 153 ntBASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm18054-201ENSMUST00000207539 555 ntBASIC12.6□□□□□ -0.39
Atf6F6VAN0 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.6□□□□□ -0.39
Atf6F6VAN0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.6□□□□□ -0.39
Atf6F6VAN0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atf6F6VAN0 Pck2-205ENSMUST00000226352 2784 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Map1b-203ENSMUST00000223725 2669 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.59□□□□□ -0.39
Atf6F6VAN0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Atf6F6VAN0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.58□□□□□ -0.39
Atf6F6VAN0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atf6F6VAN0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atf6F6VAN0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atf6F6VAN0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atf6F6VAN0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms