Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h2aeC0HKE4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h2aeC0HKE4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Gm8018-201ENSMUST00000173536 789 ntBASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Gm7063-201ENSMUST00000186840 981 ntBASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Daam2-202ENSMUST00000224595 1926 ntBASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h2aeC0HKE4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms