Protein–RNA interactions for Protein: B2RR83

Ythdc2, Probable ATP-dependent RNA helicase YTHDC2, mousemouse

Known RBP Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdc2B2RR83 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ythdc2B2RR83 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ythdc2B2RR83 Gm2420-201ENSMUST00000119864 2149 ntBASIC18.17■□□□□ 0.5
Ythdc2B2RR83 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ythdc2B2RR83 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ythdc2B2RR83 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Gm4294-201ENSMUST00000105169 614 ntBASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Gm13624-201ENSMUST00000120263 462 ntBASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Gm14052-201ENSMUST00000121434 1031 ntBASIC18.16■□□□□ 0.5
Ythdc2B2RR83 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC18.16■□□□□ 0.5
Ythdc2B2RR83 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Gm6189-201ENSMUST00000164487 2082 ntBASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ythdc2B2RR83 Mir453-201ENSMUST00000104732 82 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm12389-201ENSMUST00000117696 418 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm13827-201ENSMUST00000148801 372 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 CT030170.2-201ENSMUST00000223267 126 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 AC156790.2-201ENSMUST00000227115 568 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm6158-201ENSMUST00000109467 904 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm9192-201ENSMUST00000183221 985 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Mir8093-201ENSMUST00000185043 137 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Gm33707-201ENSMUST00000195135 569 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 AC129975.1-201ENSMUST00000224816 592 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 CT010480.2-201ENSMUST00000225424 737 ntBASIC18.15■□□□□ 0.5
Ythdc2B2RR83 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ythdc2B2RR83 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC18.14■□□□□ 0.5
Ythdc2B2RR83 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ythdc2B2RR83 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ythdc2B2RR83 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ythdc2B2RR83 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ythdc2B2RR83 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ythdc2B2RR83 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Gm7211-201ENSMUST00000172692 1118 ntBASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Mir7035-201ENSMUST00000184713 82 ntBASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Gm4978-201ENSMUST00000071565 801 ntBASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.14■□□□□ 0.49
Ythdc2B2RR83 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ythdc2B2RR83 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ythdc2B2RR83 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ythdc2B2RR83 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ythdc2B2RR83 Gm9415-201ENSMUST00000200462 1321 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 154.5 ms