Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SncaipQ99ME3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.7□□□□□ -0.38
SncaipQ99ME3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SncaipQ99ME3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SncaipQ99ME3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SncaipQ99ME3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SncaipQ99ME3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.69□□□□□ -0.38
SncaipQ99ME3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Gm44958-201ENSMUST00000203734 736 ntBASIC12.69□□□□□ -0.38
SncaipQ99ME3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.69□□□□□ -0.38
SncaipQ99ME3 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.69□□□□□ -0.38
SncaipQ99ME3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.69□□□□□ -0.38
SncaipQ99ME3 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.69□□□□□ -0.38
SncaipQ99ME3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.69□□□□□ -0.38
SncaipQ99ME3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.69□□□□□ -0.38
SncaipQ99ME3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.68□□□□□ -0.38
SncaipQ99ME3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.68□□□□□ -0.38
SncaipQ99ME3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.68□□□□□ -0.38
SncaipQ99ME3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.68□□□□□ -0.38
SncaipQ99ME3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SncaipQ99ME3 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.67□□□□□ -0.38
SncaipQ99ME3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.67□□□□□ -0.38
SncaipQ99ME3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SncaipQ99ME3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms