Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Mir1894-201ENSMUST00000122802 81 ntBASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm22588-201ENSMUST00000157510 140 ntBASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm6266-201ENSMUST00000203844 806 ntBASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm18062-201ENSMUST00000208020 547 ntBASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm18055-201ENSMUST00000208254 547 ntBASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm17794-201ENSMUST00000220252 955 ntBASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb3Q91XZ7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm13740-201ENSMUST00000120590 310 ntBASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms