Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm17827-201ENSMUST00000211825 742 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.16□□□□□ -0.3
TraipQ8VIG6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TraipQ8VIG6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.15□□□□□ -0.3
TraipQ8VIG6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.15□□□□□ -0.3
TraipQ8VIG6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Gm43930-201ENSMUST00000203868 845 ntBASIC13.15□□□□□ -0.3
TraipQ8VIG6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TraipQ8VIG6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
TraipQ8VIG6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TraipQ8VIG6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm14247-201ENSMUST00000120950 237 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm11450-201ENSMUST00000121144 333 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm45394-201ENSMUST00000209240 1175 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.14□□□□□ -0.31
TraipQ8VIG6 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.13□□□□□ -0.31
TraipQ8VIG6 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TraipQ8VIG6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms