Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm25261-201ENSMUST00000157416 134 ntBASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Gm10076-201ENSMUST00000073238 384 ntBASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Snora73a-201ENSMUST00000082453 205 ntBASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.79□□□□□ -0.52
Lsm1Q8VC85 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Gm4984-201ENSMUST00000115987 360 ntBASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm1Q8VC85 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm1Q8VC85 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm1Q8VC85 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.77□□□□□ -0.52
Lsm1Q8VC85 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Lsm1Q8VC85 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm1Q8VC85 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm1Q8VC85 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Lsm1Q8VC85 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Lsm1Q8VC85 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
Lsm1Q8VC85 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.77□□□□□ -0.53
Lsm1Q8VC85 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm24548-201ENSMUST00000158650 108 ntBASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm16379-201ENSMUST00000161469 348 ntBASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm17150-201ENSMUST00000165577 381 ntBASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm8762-201ENSMUST00000193486 339 ntBASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Lsm1Q8VC85 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms