Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Gm14723-201ENSMUST00000118686 215 ntBASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Gm8885-201ENSMUST00000189382 598 ntBASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Gm43822-201ENSMUST00000200285 476 ntBASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rpap2Q8VC34 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rpap2Q8VC34 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rpap2Q8VC34 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Gm22323-201ENSMUST00000103832 109 ntBASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Gm14109-201ENSMUST00000118814 309 ntBASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.45□□□□□ -0.26
Rpap2Q8VC34 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rpap2Q8VC34 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms