Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Gm43438-201ENSMUST00000198133 379 ntBASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 AC155266.1-201ENSMUST00000220762 904 ntBASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rtn1Q8K0T0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Rtn1Q8K0T0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rtn1Q8K0T0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rtn1Q8K0T0 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.21□□□□□ -0.14
Rtn1Q8K0T0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Rtn1Q8K0T0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Rtn1Q8K0T0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rtn1Q8K0T0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Gm9996-201ENSMUST00000070359 913 ntBASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rtn1Q8K0T0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm3096-201ENSMUST00000185770 364 ntBASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rtn1Q8K0T0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.18□□□□□ -0.14
Rtn1Q8K0T0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rtn1Q8K0T0 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.18□□□□□ -0.14
Rtn1Q8K0T0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rtn1Q8K0T0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms